Transcript: ENST00000269385.4 CBX8-001

Description

chromobox homolog 8 [Source:HGNC Symbol;Acc:15962]

Gene Synonyms

HPC3, PC3, RC1

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 3204 variant alleles and maps to 336 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269385.4	CBX8-001	3791	389aa	ENSP00000269385.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11765	C9JM54 Q9HC52	NM_020649.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413392.1	CBX8-002	777	242aa	ENSP00000405058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6K3 C9JM54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427800.2	CBX8-004	665	175aa	ENSP00000408753.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485449.1	CBX8-003	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,791 bps, Translation length: 389 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HC52

CCDS

This transcript is a member of the Human CCDS set: CCDS11765

Version

ENST00000269385.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318011 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.