Transcript: ENST00000269216.3 GATA6-001

Description

GATA binding protein 6 [Source:HGNC Symbol;Acc:4174]

Location

About this transcript

This transcript has 7 exons, is annotated with 25 domains and features, is associated with 15108 variant alleles and maps to 438 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269216.3	GATA6-001	3770	595aa	ENSP00000269216.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11872	Q05CA6 Q92908	NM_005257.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581694.1	GATA6-002	2057	595aa	ENSP00000462313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11872	Q05CA6 Q92908	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,770 bps, Translation length: 595 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92908

CCDS

This transcript is a member of the Human CCDS set: CCDS11872

Version

ENST00000269216.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254696 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.