Transcript: ENST00000262891.4 MARK4-001

Description

MAP/microtubule affinity-regulating kinase 4 [Source:HGNC Symbol;Acc:13538]

Gene Synonyms

FLJ90097, KIAA1860, MARK4L, MARK4S, MARKL1, MARKL1L, Nbla00650, PAR-1D

Location

Chromosome 19: 45,754,516-45,806,951 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 24 domains and features, is associated with 25089 variant alleles and maps to 631 oligo probes.

Gene

This transcript is a product of gene ENSG00000007047.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262891.4	MARK4-001	3573	752aa	ENSP00000262891.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56097	K7EK17 K7EKG8 Q96GZ3 Q96L34	NM_001199867.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000300843.4	MARK4-002	5209	688aa	ENSP00000300843.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12658	K7EK17 K7EKG8 Q3LID9 Q96L34	NM_031417.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590909.1	MARK4-006	594	74aa	ENSP00000465613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK17 K7EKG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587566.1	MARK4-010	553	62aa	ENSP00000465414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK17	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592207.1	MARK4-008	789	48aa	ENSP00000466843.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592762.1	MARK4-005	683	97aa	ENSP00000466702.1	Nonsense mediated decay		Q6IPE9	-	-
ENST00000588621.1	MARK4-003	2024	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590897.1	MARK4-009	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588533.1	MARK4-007	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,573 bps, Translation length: 752 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96L34

CCDS

This transcript is a member of the Human CCDS set: CCDS56097

Version

ENST00000262891.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457537 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000262891.4 MARK4-001

Summary