Transcript: ENST00000262812.4 COPE-001

Description

coatomer protein complex, subunit epsilon [Source:HGNC Symbol;Acc:2234]

Gene Synonyms

epsilon-COP

Location

Chromosome 19: 19,010,323-19,030,206 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 10551 variant alleles and maps to 460 oligo probes.

Gene

This transcript is a product of gene ENSG00000105669.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262812.4	COPE-001	1141	308aa	ENSP00000262812.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12387	O14579	NM_007263.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000600932.1	COPE-004	1144	331aa	ENSP00000469035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXB4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000349893.4	COPE-005	948	256aa	ENSP00000343134.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12389	O14579	NM_199444.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000351079.4	COPE-002	907	257aa	ENSP00000345674.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12388	O14579	NM_199442.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000593827.1	COPE-008	601	146aa	ENSP00000471034.1	Nonsense mediated decay		M0R061	-	-
ENST00000598969.1	COPE-003	1770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000597646.1	COPE-007	868	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599964.1	COPE-006	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000595984.1	COPE-009	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000600528.1	COPE-010	261	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000597026.1	COPE-011	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,141 bps, Translation length: 308 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14579

CCDS

This transcript is a member of the Human CCDS set: CCDS12387

Version

ENST00000262812.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000464801 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000262812.4 COPE-001

Summary