Transcript: ENST00000262320.3 AXIN1-001

Description

axin 1 [Source:HGNC Symbol;Acc:903]

Gene Synonyms

AXIN, PPP1R49

Location

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 44279 variant alleles and maps to 438 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262320.3	AXIN1-001	3643	862aa	ENSP00000262320.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10405	O15169	NM_003502.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000354866.3	AXIN1-002	3324	826aa	ENSP00000346935.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10406	O15169	NM_181050.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457798.1	AXIN1-005	334	102aa	ENSP00000416835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AH42	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481769.1	AXIN1-004	1089	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461023.1	AXIN1-007	6340	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,643 bps, Translation length: 862 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15169

CCDS

This transcript is a member of the Human CCDS set: CCDS10405

Version

ENST00000262320.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000139441 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.