Transcript: ENST00000261448.5 CASQ2-001

Description

calsequestrin 2 (cardiac muscle) [Source:HGNC Symbol;Acc:1513]

Gene Synonyms

PDIB2

Location

About this transcript

This transcript has 11 exons, is annotated with 25 domains and features, is associated with 32090 variant alleles and maps to 509 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261448.5	CASQ2-001	2674	399aa	ENSP00000261448.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS884	O14958	NM_001232.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456138.2	CASQ2-201	1369	328aa	ENSP00000403858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIB0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000488931.1	CASQ2-002	220	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,674 bps, Translation length: 399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14958

CCDS

This transcript is a member of the Human CCDS set: CCDS884

Version

ENST00000261448.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000033091 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.