Transcript: ENST00000261070.2 COX17-001

Description

COX17 cytochrome c oxidase copper chaperone [Source:HGNC Symbol;Acc:2264]

Location

Chromosome 3: 119,388,118-119,396,250 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 3737 variant alleles and maps to 310 oligo probes.

Gene

This transcript is a product of gene ENSG00000138495.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261070.2	COX17-001	684	63aa	ENSP00000261070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2993	Q14061	NM_005694.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000497116.1	COX17-006	660	63aa	ENSP00000417923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2993	Q14061	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000484810.1	COX17-005	471	98aa	ENSP00000417651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8T6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468918.1	COX17-002	555	63aa	ENSP00000417805.1	Nonsense mediated decay	CCDS2993	Q14061	-	-
ENST00000490145.1	COX17-007	513	45aa	ENSP00000420406.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486606.1	COX17-004	430	58aa	ENSP00000417120.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497997.1	COX17-003	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 684 bps, Translation length: 63 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14061

CCDS

This transcript is a member of the Human CCDS set: CCDS2993

Version

ENST00000261070.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355297 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000261070.2 COX17-001

Summary