Transcript: ENST00000260653.3 SIX3-001

Description

SIX homeobox 3 [Source:HGNC Symbol;Acc:10889]

Gene Synonyms

HPE2

Location

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 2810 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260653.3	SIX3-001	2658	332aa	ENSP00000260653.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1821	A0PJI2 O95343 Q9NSJ2	NM_005413.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,658 bps, Translation length: 332 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95343

CCDS

This transcript is a member of the Human CCDS set: CCDS1821

Version

ENST00000260653.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000326192 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.