Transcript: ENST00000260361.4 NDUFAF1-001

Description

NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 [Source:HGNC Symbol;Acc:18828]

Gene Synonyms

CGI-65, CGI65, CIA30

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 8269 variant alleles and maps to 347 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260361.4	NDUFAF1-001	1457	327aa	ENSP00000260361.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10075	H0YNB7 H0YNN4 Q9Y375	NM_016013.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000558719.1	NDUFAF1-004	837	191aa	ENSP00000454083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNN4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560978.1	NDUFAF1-003	781	209aa	ENSP00000453944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNB7 H0YNN4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559127.1	NDUFAF1-002	1585	261aa	ENSP00000453027.1	Nonsense mediated decay		H0YL22 H0YNB7 H0YNN4	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,457 bps, Translation length: 327 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y375

CCDS

This transcript is a member of the Human CCDS set: CCDS10075

Version

ENST00000260361.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252692 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.