Transcript: ENST00000259808.4 RIPK1-005

Description

receptor (TNFRSF)-interacting serine-threonine kinase 1 [Source:HGNC Symbol;Acc:10019]

Gene Synonyms

RIP, RIP1

Location

About this transcript

This transcript has 11 exons, is annotated with 20 domains and features, is associated with 20725 variant alleles and maps to 709 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000259808.4	RIPK1-005	4160	671aa	ENSP00000259808.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4482	Q13546	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380409.2	RIPK1-201	3864	671aa	ENSP00000369773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4482	Q13546	NM_003804.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541791.1	RIPK1-202	3133	625aa	ENSP00000442294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q13546	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000479389.1	RIPK1-004	1481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,160 bps, Translation length: 671 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13546

CCDS

This transcript is a member of the Human CCDS set: CCDS4482

Version

ENST00000259808.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000039659 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.