Transcript: ENST00000252711.2 NDUFA10-001

Description

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [Source:HGNC Symbol;Acc:7684]

Gene Synonyms

CI-42KD, CI-42k

Location

Chromosome 2: 240,896,789-240,964,819 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 30348 variant alleles and maps to 519 oligo probes.

Gene

This transcript is a product of gene ENSG00000130414.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252711.2	NDUFA10-001	4915	355aa	ENSP00000252711.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2531	O95299 Q53QE8 Q53SW4	NM_004544.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000404554.1	NDUFA10-005	1557	390aa	ENSP00000385697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESZ7 Q53QE8 Q53SW4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000307300.4	NDUFA10-004	1313	429aa	ENSP00000302321.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WXC9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000443626.1	NDUFA10-006	776	244aa	ENSP00000411527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6X0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000407129.3	NDUFA10-003	699	201aa	ENSP00000383975.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N1B9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000419408.1	NDUFA10-011	662	129aa	ENSP00000408055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2W5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000444548.1	NDUFA10-010	621	133aa	ENSP00000403080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448880.1	NDUFA10-012	434	138aa	ENSP00000408224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2X4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414580.1	NDUFA10-007	562	94aa	ENSP00000388413.1	Nonsense mediated decay		F8WEH0	-	-
ENST00000471378.1	NDUFA10-013	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485344.2	NDUFA10-002	4509	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476216.1	NDUFA10-009	817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497536.1	NDUFA10-008	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,915 bps, Translation length: 355 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95299

CCDS

This transcript is a member of the Human CCDS set: CCDS2531

Version

ENST00000252711.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257180 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000252711.2 NDUFA10-001

Summary