Transcript: ENST00000249269.4 PMPCB-001

Description

peptidase (mitochondrial processing) beta [Source:HGNC Symbol;Acc:9119]

Gene Synonyms

Beta-MPP, MPP11, MPPB, MPPP52, P-52

Location

Chromosome 7: 102,937,869-102,953,682 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 7173 variant alleles and maps to 507 oligo probes.

Gene

This transcript is a product of gene ENSG00000105819.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000249269.4	PMPCB-001	2472	489aa	ENSP00000249269.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5730	O75439	NM_004279.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000420236.2	PMPCB-201	2385	403aa	ENSP00000410393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ERZ4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428154.1	PMPCB-007	1714	490aa	ENSP00000390035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V0E4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000444457.1	PMPCB-002	2385	122aa	ENSP00000388934.1	Nonsense mediated decay		F8WEC8	-	-
ENST00000453466.1	PMPCB-004	1509	119aa	ENSP00000408682.1	Nonsense mediated decay		F8WEA6	-	-
ENST00000443722.1	PMPCB-006	1323	122aa	ENSP00000402859.1	Nonsense mediated decay		F8WBE1	-	-
ENST00000456433.1	PMPCB-009	904	202aa	ENSP00000397884.1	Nonsense mediated decay		F8WAZ6	-	-
ENST00000469560.1	PMPCB-008	1615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498530.1	PMPCB-005	1161	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,472 bps, Translation length: 489 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75439

CCDS

This transcript is a member of the Human CCDS set: CCDS5730

Version

ENST00000249269.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000347913 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000249269.4 PMPCB-001

Summary