Transcript: ENST00000248846.5 TUBGCP6-001

Description

tubulin, gamma complex associated protein 6 [Source:HGNC Symbol;Acc:18127]

Gene Synonyms

DJ402G11.6, GCP-6, GCP6, KIAA1669, MCCRP, MCPHCR

Location

Chromosome 22: 50,656,118-50,682,993 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 13 domains and features, is associated with 17788 variant alleles and maps to 820 oligo probes.

Gene

This transcript is a product of gene ENSG00000128159.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248846.5	TUBGCP6-001	5612	1819aa	ENSP00000248846.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14087	Q96RT7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439308.2	TUBGCP6-201	6053	1493aa	ENSP00000397387.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQL8	NM_020461.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425018.1	TUBGCP6-006	1509	488aa	ENSP00000405979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2H5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000434349.1	TUBGCP6-007	830	277aa	ENSP00000409650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000491449.1	TUBGCP6-003	4044	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473946.1	TUBGCP6-004	1733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489511.1	TUBGCP6-005	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498611.1	TUBGCP6-002	5274	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 5,612 bps, Translation length: 1,819 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RT7

CCDS

This transcript is a member of the Human CCDS set: CCDS14087

Version

ENST00000248846.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000075004 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000248846.5 TUBGCP6-001

Summary