Transcript: ENST00000248553.6 HSPB1-001

Description

heat shock 27kDa protein 1 [Source:HGNC Symbol;Acc:5246]

Gene Synonyms

CMT2F, HEL-S-102, HMN2B, HS.76067, HSP27, HSP28, Hs.76067, Hsp25, SRP27

Location

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 1742 variant alleles and maps to 492 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248553.6	HSPB1-001	909	205aa	ENSP00000248553.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5583	C9J3N8 P04792	NM_001540.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000429938.1	HSPB1-003	527	37aa	ENSP00000405285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3N8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447574.1	HSPB1-002	1455	186aa	ENSP00000414357.1	Nonsense mediated decay		F8WE04	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 909 bps, Translation length: 205 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04792

CCDS

This transcript is a member of the Human CCDS set: CCDS5583

Version

ENST00000248553.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252958 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.