Transcript: ENST00000244520.5 SNRPC-001

Description

small nuclear ribonucleoprotein polypeptide C [Source:HGNC Symbol;Acc:11157]

Gene Synonyms

U1-C, U1C, Yhc1

Location

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 7023 variant alleles and maps to 460 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000244520.5	SNRPC-001	842	159aa	ENSP00000244520.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34436	P09234 Q5TAL2 Q5TAL4	NM_003093.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000374017.3	SNRPC-002	1054	180aa	ENSP00000363129.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TAL2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000374018.1	SNRPC-003	600	118aa	ENSP00000363130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TAL2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000474635.1	SNRPC-004	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 842 bps, Translation length: 159 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09234

CCDS

This transcript is a member of the Human CCDS set: CCDS34436

Version

ENST00000244520.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040255 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.