Transcript: ENST00000240651.9 PYROXD1-001

Description

pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:HGNC Symbol;Acc:26162]

Gene Synonyms

DKFZp762G094, FLJ22028

Location

Chromosome 12: 21,590,611-21,623,300 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 15339 variant alleles and maps to 536 oligo probes.

Gene

This transcript is a product of gene ENSG00000121350.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240651.9	PYROXD1-001	3169	500aa	ENSP00000240651.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31755	B3KWN8 B5MDP1 Q8WU10	NM_024854.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538582.1	PYROXD1-005	3639	429aa	ENSP00000438505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KWN8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545178.1	PYROXD1-201	1042	139aa	ENSP00000443912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEW4 B5MDP1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000375266.4	PYROXD1-004	1849	55aa	ENSP00000364415.4	Nonsense mediated decay		B5MDP1	-	-
ENST00000544970.1	PYROXD1-003	1471	139aa	ENSP00000439106.1	Nonsense mediated decay		B4DEW4 B5MDP1	-	-
ENST00000543476.1	PYROXD1-009	1047	139aa	ENSP00000440192.1	Nonsense mediated decay		B4DEW4 B5MDP1	-	-
ENST00000544187.1	PYROXD1-006	411	60aa	ENSP00000444800.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538615.1	PYROXD1-010	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536851.1	PYROXD1-008	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538072.1	PYROXD1-007	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,169 bps, Translation length: 500 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WU10

CCDS

This transcript is a member of the Human CCDS set: CCDS31755

Version

ENST00000240651.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000402363 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000240651.9 PYROXD1-001

Summary