Transcript: ENST00000238936.4 TMEM180-001

Description

transmembrane protein 180 [Source:HGNC Symbol;Acc:26196]

Gene Synonyms

C10orf77, FLJ22529, bA18I14.8

Location

Chromosome 10: 104,221,152-104,236,802 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 7141 variant alleles and maps to 484 oligo probes.

Gene

This transcript is a product of gene ENSG00000138111.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000238936.4	TMEM180-001	2852	517aa	ENSP00000238936.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7535	B4DKJ1 Q14CX5	NM_024789.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000366277.2	TMEM180-201	1897	246aa	ENSP00000437572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKJ1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369931.3	TMEM180-202	823	153aa	ENSP00000358947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6UWF4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000450947.2	TMEM180-002	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469294.1	TMEM180-003	442	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000428200.1	TMEM180-004	424	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,852 bps, Translation length: 517 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14CX5

CCDS

This transcript is a member of the Human CCDS set: CCDS7535

Version

ENST00000238936.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000050075 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000238936.4 TMEM180-001

Summary