Transcript: ENST00000238831.4 YIPF4-001

Description

Yip1 domain family, member 4 [Source:HGNC Symbol;Acc:28145]

Gene Synonyms

FinGER4, MGC11061

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 20408 variant alleles and maps to 755 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000238831.4	YIPF4-001	11949	244aa	ENSP00000238831.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1781	Q9BSR8	NM_032312.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000441084.1	YIPF4-004	312	33aa	ENSP00000414267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000437765.1	YIPF4-003	728	58aa	ENSP00000394339.1	Nonsense mediated decay		H7C0D5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495355.1	YIPF4-002	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 11,949 bps, Translation length: 244 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BSR8

CCDS

This transcript is a member of the Human CCDS set: CCDS1781

Version

ENST00000238831.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250250 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.