Transcript: ENST00000238789.5 ATAD2B-001

Description

ATPase family, AAA domain containing 2B [Source:HGNC Symbol;Acc:29230]

Gene Synonyms

KIAA1240

Location

Chromosome 2: 23,971,534-24,149,984 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 27 domains and features, is associated with 77932 variant alleles and maps to 1112 oligo probes.

Gene

This transcript is a product of gene ENSG00000119778.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000238789.5	ATAD2B-001	8103	1458aa	ENSP00000238789.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46227	B3KWS5 Q9ULI0	NM_017552.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381024.4	ATAD2B-004	5579	734aa	ENSP00000370412.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000439915.1	ATAD2B-002	1406	370aa	ENSP00000403177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000366438.2	ATAD2B-005	867	155aa	ENSP00000415926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000458510.1	ATAD2B-006	554	64aa	ENSP00000392764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1G9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474583.1	ATAD2B-003	3765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498006.1	ATAD2B-007	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478885.1	ATAD2B-008	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486610.1	ATAD2B-009	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 8,103 bps, Translation length: 1,458 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ULI0

CCDS

This transcript is a member of the Human CCDS set: CCDS46227

Version

ENST00000238789.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000324333 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000238789.5 ATAD2B-001

Summary