Transcript: ENST00000237014.3 TTR-001

Description

transthyretin [Source:HGNC Symbol;Acc:12405]

Gene Synonyms

CTS, CTS1, HEL111, HsT2651, PALB, TBPA

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 3375 variant alleles and maps to 359 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000237014.3	TTR-001	957	147aa	ENSP00000237014.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11899	A6XMH1 E9KL36 P02766	NM_000371.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541025.2	TTR-003	956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000432547.3	TTR-002	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 957 bps, Translation length: 147 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02766

CCDS

This transcript is a member of the Human CCDS set: CCDS11899

Version

ENST00000237014.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254948 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.