Transcript: ENST00000232975.3 TNNC1-001

Description

troponin C type 1 (slow) [Source:HGNC Symbol;Acc:11943]

Gene Synonyms

CMD1Z, CMH13, TN-C, TNC, TNNC

Location

About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 1540 variant alleles and maps to 301 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000496590.1	TNNC1-002	727	99aa	ENSP00000420596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000232975.3	TNNC1-001	714	161aa	ENSP00000232975.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2857	C9JDI3 P63316 Q6FH91	NM_003280.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461086.1	TNNC1-004	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 714 bps, Translation length: 161 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P63316

CCDS

This transcript is a member of the Human CCDS set: CCDS2857

Version

ENST00000232975.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000351371 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.