Transcript: ENST00000230340.4 BYSL-001

Description

bystin-like [Source:HGNC Symbol;Acc:1157]

Gene Synonyms

BYSTIN

Location

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 5559 variant alleles and maps to 396 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000230340.4	BYSL-001	2029	437aa	ENSP00000230340.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34450	Q13895	NM_004053.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372996.2	BYSL-006	1299	183aa	ENSP00000362087.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489290.1	BYSL-004	1153	194aa	ENSP00000417813.1	Nonsense mediated decay		F8WBL2	-	-
ENST00000475702.1	BYSL-005	670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494032.1	BYSL-003	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,029 bps, Translation length: 437 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13895

CCDS

This transcript is a member of the Human CCDS set: CCDS34450

Version

ENST00000230340.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040535 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.