Transcript: ENST00000157812.2 PSMC4-001

Description

proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:HGNC Symbol;Acc:9551]

Gene Synonyms

MGC13687, MGC23214, MGC8570, MIP224, RPT3, S6, TBP-7, TBP7

Location

Chromosome 19: 40,476,912-40,487,348 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 4607 variant alleles and maps to 433 oligo probes.

Gene

This transcript is a product of gene ENSG00000013275.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000157812.2	PSMC4-001	1591	418aa	ENSP00000157812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12547	A8K2M0 P43686	NM_153001.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455878.2	PSMC4-002	1333	387aa	ENSP00000413869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46076	P43686	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000601697.1	PSMC4-004	1623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593455.1	PSMC4-003	1532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596386.1	PSMC4-006	929	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601194.1	PSMC4-005	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,591 bps, Translation length: 418 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43686

CCDS

This transcript is a member of the Human CCDS set: CCDS12547

Version

ENST00000157812.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000462485 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000157812.2 PSMC4-001

Summary