Transcript: ENST00000070846.6 PKP2-002

Description

plakophilin 2 [Source:HGNC Symbol;Acc:9024]

Gene Synonyms

ARVD9

Location

Chromosome 12: 32,943,788-33,049,690 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features, is associated with 45014 variant alleles and maps to 608 oligo probes.

Gene

This transcript is a product of gene ENSG00000057294.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000070846.6	PKP2-002	4241	881aa	ENSP00000070846.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8731	Q99959	NM_004572.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000340811.4	PKP2-001	4302	837aa	ENSP00000342800.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31771	Q99959	NM_001005242.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000546741.1	PKP2-003	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552612.1	PKP2-005	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546769.1	PKP2-007	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546498.1	PKP2-004	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549461.1	PKP2-006	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,241 bps, Translation length: 881 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99959

CCDS

This transcript is a member of the Human CCDS set: CCDS8731

Version

ENST00000070846.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404449 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000070846.6 PKP2-002

Summary