Transcript: ENST00000400613.4 C9orf152-001

Description

chromosome 9 open reading frame 152 [Source:HGNC Symbol;Acc:31455]

Gene Synonyms

bA470J20.2

Location

About this transcript

This transcript has 2 exons, is associated with 3953 variant alleles and maps to 254 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400613.4	C9orf152-001	2717	239aa	ENSP00000383456.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35102	A8K2L3 Q5JTZ5	NM_001012993.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000473442.1	C9orf152-002	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,717 bps, Translation length: 239 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JTZ5

CCDS

This transcript is a member of the Human CCDS set: CCDS35102

Version

ENST00000400613.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053602 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.