Transcript: ENST00000591812.1 RINL-001

Description

Ras and Rab interactor-like [Source:HGNC Symbol;Acc:24795]

Gene Synonyms

FLJ45909

Location

Chromosome 19: 39,359,622-39,368,919 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 12 domains and features, is associated with 4440 variant alleles and maps to 306 oligo probes.

Gene

This transcript is a product of gene ENSG00000187994.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000591812.1	RINL-001	1910	566aa	ENSP00000467107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59386	M0QZ15 Q6ZS11	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000340740.3	RINL-201	3021	452aa	ENSP00000340369.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12522	M0QZ15 Q6ZS11	NM_198445.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000598904.1	RINL-012	1846	452aa	ENSP00000469568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12522	M0QZ15 Q6ZS11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000593424.1	RINL-009	653	173aa	ENSP00000469510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZ15	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593809.1	RINL-011	346	54aa	ENSP00000470224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZ15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000602238.1	RINL-007	186	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589111.1	RINL-002	2290	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598048.1	RINL-004	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596919.1	RINL-013	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596961.1	RINL-010	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000599911.1	RINL-005	504	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,910 bps, Translation length: 566 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZS11

CCDS

This transcript is a member of the Human CCDS set: CCDS59386

Version

ENST00000591812.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460433 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000591812.1 RINL-001

Summary