Transcript: ENST00000315927.4 YOD1-002

Description

YOD1 deubiquitinase [Source:HGNC Symbol;Acc:25035]

Gene Synonyms

DKFZp451J1719, DUBA8, HIN7, OTUD2, PRO0907

Location

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 3164 variant alleles and maps to 425 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315927.4	YOD1-002	6265	348aa	ENSP00000326813.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31002	Q5VVQ6	NM_018566.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367084.1	YOD1-001	6291	304aa	ENSP00000356051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60402	Q5VVQ6	NM_001276320.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000391927.1	YOD1-201	6086	304aa	ENSP00000375793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60402	Q5VVQ6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 6,265 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VVQ6

CCDS

This transcript is a member of the Human CCDS set: CCDS31002

Version

ENST00000315927.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000087837 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.