Transcript: ENST00000316199.6 AURKB-002

Description

aurora kinase B [Source:HGNC Symbol;Acc:11390]

Gene Synonyms

AIK2, AIM-1, AIM1, AIRK2, ARK2, Aik2, AurB, IPL1, PPP1R48, STK1, STK12, STK5, aurkb-sv1, aurkb-sv2

Location

Chromosome 17: 8,108,056-8,113,900 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 3487 variant alleles and maps to 388 oligo probes.

Gene

This transcript is a product of gene ENSG00000178999.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000585124.1	AURKB-001	1227	344aa	ENSP00000463999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11134	J3KRJ2 J3KTD6 J3QR41 Q96GD4	NM_004217.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000316199.6	AURKB-002	1249	345aa	ENSP00000313950.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS67162	J3QLN8 J9JID1	NM_001284526.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534871.1	AURKB-003	1167	303aa	ENSP00000443869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58514	J3KRJ2 J3QR41 Q96GD4	NM_001256834.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000578549.1	AURKB-005	939	312aa	ENSP00000462207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96GD4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535053.1	AURKB-201	899	142aa	ENSP00000445866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96GD4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000577833.1	AURKB-012	867	230aa	ENSP00000463636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582368.1	AURKB-011	771	172aa	ENSP00000464031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRJ2 J3QR41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581511.1	AURKB-008	742	228aa	ENSP00000462930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRJ2 J3KTD6 J3QR41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584972.1	AURKB-016	739	242aa	ENSP00000462858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583915.1	AURKB-009	397	69aa	ENSP00000462027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000580998.1	AURKB-013	746	123aa	ENSP00000461981.1	Nonsense mediated decay		J3KRF8	-	-
ENST00000584561.1	AURKB-010	1010	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580390.1	AURKB-014	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578753.1	AURKB-015	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583124.1	AURKB-007	323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,249 bps, Translation length: 345 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS67162

Version

ENST00000316199.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441842 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000316199.6 AURKB-002

Summary