Transcript: ENST00000296387.1 CLDN19-001

Description

claudin 19 [Source:HGNC Symbol;Acc:2040]

Gene Synonyms

HOMG5

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 3427 variant alleles and maps to 347 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296387.1	CLDN19-001	2859	224aa	ENSP00000296387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS471	Q8N6F1	NM_148960.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539749.1	CLDN19-201	3517	218aa	ENSP00000443229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53306	Q8N6F1	NM_001185117.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372539.3	CLDN19-002	1586	211aa	ENSP00000361617.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44125	Q8N6F1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,859 bps, Translation length: 224 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N6F1

CCDS

This transcript is a member of the Human CCDS set: CCDS471

Version

ENST00000296387.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000019788 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.