Transcript: ENST00000344887.5 TNNI3-001

Description

troponin I type 3 (cardiac) [Source:HGNC Symbol;Acc:11947]

Gene Synonyms

CMD1FF, CMD2A, CMH7, RCM1, TNNC1, cTnI

Location

Chromosome 19: 55,663,138-55,669,100 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 4019 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000129991.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344887.5	TNNI3-001	840	210aa	ENSP00000341838.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42628	A8CLQ8 A8CN18 A9UD06 P19429 Q6FGX2	NM_000363.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588882.1	TNNI3-006	669	185aa	ENSP00000466729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8CLQ8 A9UD06 K7EN02	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000586858.1	TNNI3-005	286	57aa	ENSP00000465258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJP0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590463.1	TNNI3-003	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586669.1	TNNI3-004	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587176.1	TNNI3-009	992	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585806.1	TNNI3-007	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586446.1	TNNI3-002	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589864.1	TNNI3-008	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 840 bps, Translation length: 210 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19429

CCDS

This transcript is a member of the Human CCDS set: CCDS42628

Version

ENST00000344887.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452098 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000344887.5 TNNI3-001

Summary