Transcript: ENST00000337619.5 AP1S1-001

Description

adaptor-related protein complex 1, sigma 1 subunit [Source:HGNC Symbol;Acc:559]

Gene Synonyms

AP19, CLAPS1, MEDNIK, SIGMA1A, WUGSC:H_DJ0747G18.2

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 3603 variant alleles and maps to 487 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337619.5	AP1S1-001	1306	158aa	ENSP00000336666.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47669	P61966	NM_001283.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000429457.1	AP1S1-004	573	191aa	ENSP00000399902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000443943.1	AP1S1-003	741	158aa	ENSP00000410780.1	Nonsense mediated decay	CCDS47669	P61966	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,306 bps, Translation length: 158 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61966

CCDS

This transcript is a member of the Human CCDS set: CCDS47669

Version

ENST00000337619.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000347439 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.