Transcript: ENST00000376259.3 TNFRSF1B-001

Description

tumor necrosis factor receptor superfamily, member 1B [Source:HGNC Symbol;Acc:11917]

Gene Synonyms

CD120b, TBPII, TNF-R-II, TNF-R75, TNFBR, TNFR1B, TNFR2, TNFR80, TNFRSF1B, p75, p75TNFR

Location

About this transcript

This transcript has 10 exons, is annotated with 28 domains and features, is associated with 19776 variant alleles and maps to 589 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376259.3	TNFRSF1B-001	3683	461aa	ENSP00000365435.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS145	P20333 Q6LBF2 Q9UIG9 Q9UIH2	NM_001066.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536782.1	TNFRSF1B-201	557	155aa	ENSP00000440425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5A977 Q6LBF2 Q9UIH2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000492361.1	TNFRSF1B-002	3583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489921.1	TNFRSF1B-003	409	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,683 bps, Translation length: 461 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20333

CCDS

This transcript is a member of the Human CCDS set: CCDS145

Version

ENST00000376259.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000005133 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.