Transcript: ENST00000261643.3 COX10-001

Description

cytochrome c oxidase assembly homolog 10 (yeast) [Source:HGNC Symbol;Acc:2260]

Location

Chromosome 17: 13,972,846-14,111,994 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 54857 variant alleles and maps to 484 oligo probes.

Gene

This transcript is a product of gene ENSG00000006695.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261643.3	COX10-001	2873	443aa	ENSP00000261643.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11166	B4DFR1 Q12887	NM_001303.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536205.1	COX10-201	1509	251aa	ENSP00000439494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFR1 B4DJ50	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537334.1	COX10-202	1384	226aa	ENSP00000443354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFR1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000429152.2	COX10-002	875	171aa	ENSP00000397750.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C101	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581931.1	COX10-004	1509	168aa	ENSP00000462512.1	Nonsense mediated decay		J3KSJ3	-	-
ENST00000580561.1	COX10-003	1384	62aa	ENSP00000462190.1	Nonsense mediated decay		J3KRW4	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,873 bps, Translation length: 443 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12887

CCDS

This transcript is a member of the Human CCDS set: CCDS11166

Version

ENST00000261643.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000130003 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261643.3 COX10-001

Summary