Transcript: ENST00000546378.1 HOXC11-001

Description

homeobox C11 [Source:HGNC Symbol;Acc:5123]

Gene Synonyms

HOX3H

Location

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 2741 variant alleles and maps to 279 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000546378.1	HOXC11-001	3261	304aa	ENSP00000446680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8867	O43248	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000243082.4	HOXC11-002	2039	378aa	ENSP00000243082.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KMZ0	NM_014212.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 3,261 bps, Translation length: 304 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43248

CCDS

This transcript is a member of the Human CCDS set: CCDS8867

Version

ENST00000546378.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000358869 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.