Transcript: ENST00000533682.1 CLP1-001

Description

cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:16999]

Gene Synonyms

HEAB, hClp1

Location

Chromosome 11: 57,424,630-57,429,340 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 2265 variant alleles and maps to 336 oligo probes.

Gene

This transcript is a product of gene ENSG00000172409.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000533682.1	CLP1-001	2435	425aa	ENSP00000434995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7964	E9PJM4 E9PKV5 Q92989	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529430.1	CLP1-004	1778	436aa	ENSP00000433406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJM4 E9PKV5 E9PL17	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000302731.4	CLP1-003	1634	361aa	ENSP00000304704.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44600	E9PJM4 E9PKV5 Q92989	NM_006831.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525602.1	CLP1-002	1392	425aa	ENSP00000436066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7964	E9PJM4 E9PKV5 Q92989	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529773.1	CLP1-006	566	92aa	ENSP00000435287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533905.1	CLP1-005	553	132aa	ENSP00000431744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJM4 E9PKV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,435 bps, Translation length: 425 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92989

CCDS

This transcript is a member of the Human CCDS set: CCDS7964

Version

ENST00000533682.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393462 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000533682.1 CLP1-001

Summary