Transcript: ENST00000480650.2 PDZD4-006

Description

PDZ domain containing 4 [Source:HGNC Symbol;Acc:21167]

Gene Synonyms

FLJ34125, KIAA1444, LU1, PDZK4, PDZRN4L

Location

Chromosome X: 153,071,526-153,095,819 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 7742 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSG00000067840.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000164640.4	PDZD4-002	3689	769aa	ENSP00000164640.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14732	Q17RL8 Q76G19	NM_032512.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393758.2	PDZD4-201	3617	694aa	ENSP00000377355.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DWW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544474.1	PDZD4-202	2109	660aa	ENSP00000442033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZKY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480650.2	PDZD4-006	876	122aa	ENSP00000476940.1	Nonsense mediated decay		-	-	-
ENST00000475140.1	PDZD4-003	830	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483693.1	PDZD4-004	829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484792.1	PDZD4-005	777	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468491.1	PDZD4-007	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480418.1	PDZD4-001	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 876 bps, Translation length: 122 residues

Version

ENST00000480650.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000061017 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000480650.2 PDZD4-006

Summary