Transcript: ENST00000427738.3 CYLD-010

Description

cylindromatosis (turban tumor syndrome) [Source:HGNC Symbol;Acc:2584]

Gene Synonyms

BRSS, CDMT, CYLD1, CYLDI, EAC, KIAA0849, MFT, MFT1, SBS, TEM, USPL2

Location

Chromosome 16: 50,776,671-50,835,846 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 21 domains and features, is associated with 23488 variant alleles and maps to 828 oligo probes.

Gene

This transcript is a product of gene ENSG00000083799.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540145.1	CYLD-201	8713	956aa	ENSP00000445447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2R7 H3BPZ5 H3BSW9 H3BTB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427738.3	CYLD-010	8503	956aa	ENSP00000392025.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45482	H3BPZ5 H3BSW9 H3BTB8 Q9NQC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311559.9	CYLD-003	5371	956aa	ENSP00000308928.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45482	H3BPZ5 H3BSW9 H3BTB8 Q9NQC7	NM_015247.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398568.2	CYLD-005	3536	953aa	ENSP00000381574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42164	H3BPZ5 H3BSW9 H3BTB8 Q9NQC7	NM_001042412.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569418.1	CYLD-001	3513	953aa	ENSP00000457576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42164	H3BPZ5 H3BSW9 H3BTB8 Q9NQC7	NM_001042355.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568704.2	CYLD-009	3292	771aa	ENSP00000456488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPZ5 H3BS09 H3BSW9 H3BTB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564326.1	CYLD-006	3259	953aa	ENSP00000454515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42164	H3BPZ5 H3BSW9 H3BTB8 Q9NQC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566206.1	CYLD-002	3104	910aa	ENSP00000462134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPZ5 H3BSW9 H3BTB8 J3KRR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566679.2	CYLD-007	1158	304aa	ENSP00000456912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPZ5 H3BSW9 H3BTB8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569681.1	CYLD-011	777	166aa	ENSP00000457108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPZ5 H3BTB8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562884.1	CYLD-015	725	104aa	ENSP00000463197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKR2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564634.1	CYLD-012	539	33aa	ENSP00000455535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566024.1	CYLD-014	409	66aa	ENSP00000458507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569891.1	CYLD-004	4665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563629.1	CYLD-008	2568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563976.1	CYLD-013	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568744.1	CYLD-016	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 8,503 bps, Translation length: 956 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQC7

CCDS

This transcript is a member of the Human CCDS set: CCDS45482

Version

ENST00000427738.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000422998 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000427738.3 CYLD-010

Summary