Transcript: ENST00000412916.2 CBFB-003

Description

core-binding factor, beta subunit [Source:HGNC Symbol;Acc:1539]

Gene Synonyms

PEBP2B

Location

Chromosome 16: 67,063,148-67,134,925 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 33651 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000067955.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290858.6	CBFB-001	3136	182aa	ENSP00000290858.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10827	J3KRT0 J3KS23 Q13951	NM_022845.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412916.2	CBFB-003	2971	187aa	ENSP00000415151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45508	J3KRT0 Q13951	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565389.1	CBFB-002	846	60aa	ENSP00000462932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561924.2	CBFB-007	584	82aa	ENSP00000462273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRT0 J3KS23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563939.2	CBFB-009	545	61aa	ENSP00000462148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564034.1	CBFB-006	509	93aa	ENSP00000456637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568858.1	CBFB-005	914	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567947.1	CBFB-010	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566281.1	CBFB-011	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,971 bps, Translation length: 187 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13951

CCDS

This transcript is a member of the Human CCDS set: CCDS45508

Version

ENST00000412916.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000421059 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000412916.2 CBFB-003

Summary