Transcript: ENST00000397332.2 MYCL-001

Description

v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog [Source:HGNC Symbol;Acc:7555]

Gene Synonyms

BHLHE38, LMYC, MYCL1, bHLHe38

Location

About this transcript

This transcript has 3 exons, is annotated with 19 domains and features, is associated with 3957 variant alleles and maps to 364 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397332.2	MYCL-001	3256	394aa	ENSP00000380494.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53300	E9PQS5 Q86YL9	NM_001033082.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429311.1	MYCL-201	2038	206aa	ENSP00000389358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQS5 P12524	NM_005376.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372815.1	MYCL-002	1944	236aa	ENSP00000361902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44117	E9PQS5 U5GXR9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372816.2	MYCL-004	1688	364aa	ENSP00000361903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30682	E9PQS5 P12524 Q86YL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450953.3	MYCL-003	426	100aa	ENSP00000434375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,256 bps, Translation length: 394 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53300

Version

ENST00000397332.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000025624 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.