Transcript: ENST00000397239.3 DEK-001

Description

DEK oncogene [Source:HGNC Symbol;Acc:2768]

Gene Synonyms

D6S231E

Location

Chromosome 6: 18,224,099-18,265,054 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 21056 variant alleles and maps to 619 oligo probes.

Gene

This transcript is a product of gene ENSG00000124795.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397239.3	DEK-001	3427	375aa	ENSP00000380414.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34344	D6RDA2 P35659	NM_003472.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000244776.7	DEK-002	1441	341aa	ENSP00000244776.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47382	P35659	NM_001134709.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507591.1	DEK-009	739	156aa	ENSP00000423427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y993 Q6MZJ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515742.1	DEK-006	661	151aa	ENSP00000423553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9L5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503715.1	DEK-005	580	122aa	ENSP00000425399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDA2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505224.1	DEK-003	1372	347aa	ENSP00000421165.1	Nonsense mediated decay		B4DFG0	-	-
ENST00000515770.1	DEK-007	730	161aa	ENSP00000422380.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512145.1	DEK-008	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,427 bps, Translation length: 375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35659

CCDS

This transcript is a member of the Human CCDS set: CCDS34344

Version

ENST00000397239.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000039962 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397239.3 DEK-001

Summary