Transcript: ENST00000396009.3 NFATC2-002

Description

nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 [Source:HGNC Symbol;Acc:7776]

Gene Synonyms

NF-ATP, NFAT1, NFATP, NFATp

Location

Chromosome 20: 50,003,494-50,159,258 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 71047 variant alleles and maps to 622 oligo probes.

Gene

This transcript is a product of gene ENSG00000101096.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371564.3	NFATC2-001	7525	921aa	ENSP00000360619.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33488	B5B2P0 Q13469	NM_012340.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396009.3	NFATC2-002	7437	925aa	ENSP00000379330.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13437	B5B2P3 B5B2P4 Q13469	NM_173091.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609943.1	NFATC2-005	5690	905aa	ENSP00000477370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68157	B5B2P2 B5B2P4	NM_001258295.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414705.1	NFATC2-004	2974	901aa	ENSP00000396471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46614	B5B2P0 Q13469	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000610033.1	NFATC2-007	2740	702aa	ENSP00000477142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68156	B5B2P0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609507.1	NFATC2-006	2662	702aa	ENSP00000477342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68156	B5B2P0	NM_001258294.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496054.1	NFATC2-003	620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 7,437 bps, Translation length: 925 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13469

CCDS

This transcript is a member of the Human CCDS set: CCDS13437

Version

ENST00000396009.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079730 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000396009.3 NFATC2-002

Summary