Transcript: ENST00000393067.3 POU2AF1-001

Description

POU class 2 associating factor 1 [Source:HGNC Symbol;Acc:9211]

Gene Synonyms

BOB1, OBF-1, OBF1, OCAB

Location

Chromosome 11: 111,222,977-111,250,417 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 13587 variant alleles and maps to 350 oligo probes.

Gene

This transcript is a product of gene ENSG00000110777.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393067.3	POU2AF1-001	3295	256aa	ENSP00000376786.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31675	Q16633	NM_006235.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531398.1	POU2AF1-007	524	127aa	ENSP00000433527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515029.2	POU2AF1-008	1973	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529065.1	POU2AF1-010	749	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530229.1	POU2AF1-012	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525584.1	POU2AF1-006	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526535.1	POU2AF1-002	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525499.1	POU2AF1-004	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525662.1	POU2AF1-005	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525890.1	POU2AF1-009	495	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525527.1	POU2AF1-011	427	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530793.1	POU2AF1-003	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,295 bps, Translation length: 256 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16633

CCDS

This transcript is a member of the Human CCDS set: CCDS31675

Version

ENST00000393067.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000391002 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000393067.3 POU2AF1-001

Summary