Transcript: ENST00000380733.4 PSIP1-003

Description

PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:9527]

Gene Synonyms

DFS70, LEDGF, PAIP, PSIP2, p52, p75

Location

Chromosome 9: 15,464,064-15,511,017 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 27456 variant alleles and maps to 591 oligo probes.

Gene

This transcript is a product of gene ENSG00000164985.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380733.4	PSIP1-003	3391	530aa	ENSP00000370109.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6479	O75475 Q8N4N4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380738.4	PSIP1-004	3364	530aa	ENSP00000370114.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6479	O75475 Q8N4N4	NM_033222.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380715.1	PSIP1-006	1966	329aa	ENSP00000370091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75475 Q8N4N4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380716.4	PSIP1-007	1889	333aa	ENSP00000370092.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6480	O75475 Q8N4N4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397519.2	PSIP1-201	1664	333aa	ENSP00000380653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6480	O75475 Q8N4N4	NM_021144.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481862.1	PSIP1-005	306	65aa	ENSP00000477077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484265.1	PSIP1-008	2065	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495873.1	PSIP1-002	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488797.1	PSIP1-001	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463712.2	PSIP1-010	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487363.1	PSIP1-009	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,391 bps, Translation length: 530 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75475

CCDS

This transcript is a member of the Human CCDS set: CCDS6479

Version

ENST00000380733.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055445 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000380733.4 PSIP1-003

Summary