Transcript: ENST00000377199.3 TRIM27-001

Description

tripartite motif containing 27 [Source:HGNC Symbol;Acc:9975]

Gene Synonyms

RFP, RNF76

Location

About this transcript

This transcript has 8 exons, is annotated with 31 domains and features, is associated with 9594 variant alleles and maps to 1599 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377199.3	TRIM27-001	2967	513aa	ENSP00000366404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4654	P14373 Q9NZT8	NM_006510.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377194.3	TRIM27-002	2686	358aa	ENSP00000366399.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P14373 Q9NZT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414543.1	TRIM27-003	1813	248aa	ENSP00000400058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498117.1	TRIM27-007	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496091.1	TRIM27-005	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467742.1	TRIM27-006	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481474.1	TRIM27-004	7006	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,967 bps, Translation length: 513 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14373

CCDS

This transcript is a member of the Human CCDS set: CCDS4654

Version

ENST00000377199.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076442 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.