Transcript: ENST00000376886.2 SSX4-001

Description

synovial sarcoma, X breakpoint 4 [Source:HGNC Symbol;Acc:11338]

Gene Synonyms

CT5.4, SSX4A

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 674 variant alleles and maps to 1316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376886.2	SSX4-001	1322	188aa	ENSP00000366083.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35240	O60224	NM_005636.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375517.3	SSX4-002	615	153aa	ENSP00000364667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43934	A8MYD4	NM_175729.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,322 bps, Translation length: 188 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60224

CCDS

This transcript is a member of the Human CCDS set: CCDS35240

Version

ENST00000376886.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058902 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.