Transcript: ENST00000372733.3 SDC4-001

Description

syndecan 4 [Source:HGNC Symbol;Acc:10661]

Gene Synonyms

SYND4, amphiglycan, ryudocan

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 10076 variant alleles and maps to 359 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372733.3	SDC4-001	2613	198aa	ENSP00000361818.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13350	B4E1S6 P31431	NM_002999.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537976.1	SDC4-201	1286	126aa	ENSP00000445353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1S6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,613 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P31431

CCDS

This transcript is a member of the Human CCDS set: CCDS13350

Version

ENST00000372733.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080515 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.