Transcript: ENST00000368498.2 GOPC-002

Description

golgi-associated PDZ and coiled-coil motif containing [Source:HGNC Symbol;Acc:17643]

Gene Synonyms

CAL, FIG, GOPC1, PIST, dJ94G16.2

Location

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 15944 variant alleles and maps to 608 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000535237.1	GOPC-201	4604	462aa	ENSP00000445690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1Y4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000052569.6	GOPC-001	4590	454aa	ENSP00000052569.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34523	Q9HD26	NM_001017408.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368498.2	GOPC-002	4450	462aa	ENSP00000357484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5117	Q9HD26	NM_020399.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467125.1	GOPC-003	930	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,450 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HD26

CCDS

This transcript is a member of the Human CCDS set: CCDS5117

Version

ENST00000368498.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000041988 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.