Transcript: ENST00000307602.4 HOOK3-001

Description

hook microtubule-tethering protein 3 [Source:HGNC Symbol;Acc:23576]

Gene Synonyms

HK3

Location

About this transcript

This transcript has 22 exons, is annotated with 15 domains and features, is associated with 59049 variant alleles and maps to 1077 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307602.4	HOOK3-001	14398	718aa	ENSP00000305699.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6139	Q86VS8	NM_032410.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533338.1	HOOK3-006	774	31aa	ENSP00000433813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533539.1	HOOK3-005	485	161aa	ENSP00000433953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YDM4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000526882.1	HOOK3-003	598	101aa	ENSP00000435077.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524839.1	HOOK3-004	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527306.1	HOOK3-002	2325	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 14,398 bps, Translation length: 718 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86VS8

CCDS

This transcript is a member of the Human CCDS set: CCDS6139

Version

ENST00000307602.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000383172 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.