Transcript: ENST00000306376.5 ETV5-001

Description

ets variant 5 [Source:HGNC Symbol;Acc:3494]

Gene Synonyms

ERM

Location

Chromosome 3: 185,764,097-185,826,901 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 25755 variant alleles and maps to 760 oligo probes.

Gene

This transcript is a product of gene ENSG00000244405.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306376.5	ETV5-001	4111	510aa	ENSP00000306894.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33906	C9J0Z2 C9J5A5 C9JMF0 P41161	NM_004454.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434744.1	ETV5-002	2213	510aa	ENSP00000413755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33906	C9J0Z2 C9J5A5 C9JMF0 P41161	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537818.1	ETV5-201	1859	552aa	ENSP00000441737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7D7 C9J0Z2 C9J5A5 C9JMF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440773.1	ETV5-003	574	150aa	ENSP00000389707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0Z2 C9J5A5 C9JMF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413301.1	ETV5-005	573	132aa	ENSP00000405157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5A5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422039.1	ETV5-006	564	132aa	ENSP00000388737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JR66	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421809.1	ETV5-007	554	140aa	ENSP00000412171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0Z2 C9J5A5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433149.1	ETV5-011	366	89aa	ENSP00000399707.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480706.1	ETV5-012	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476890.1	ETV5-004	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489830.1	ETV5-010	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484223.1	ETV5-009	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472868.2	ETV5-014	238	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475484.1	ETV5-008	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495808.1	ETV5-013	187	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 4,111 bps, Translation length: 510 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41161

CCDS

This transcript is a member of the Human CCDS set: CCDS33906

Version

ENST00000306376.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000344947 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000306376.5 ETV5-001

Summary