Transcript: ENST00000264824.4 LYL1-001

Description

lymphoblastic leukemia derived sequence 1 [Source:HGNC Symbol;Acc:6734]

Gene Synonyms

BHLHA18, bHLHa18

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 1861 variant alleles and maps to 319 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264824.4	LYL1-001	1490	280aa	ENSP00000264824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12292	K7ER61 P12980	NM_005583.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590974.1	LYL1-003	902	57aa	ENSP00000468122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER61	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590120.1	LYL1-002	1547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,490 bps, Translation length: 280 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P12980

CCDS

This transcript is a member of the Human CCDS set: CCDS12292

Version

ENST00000264824.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452827 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.